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IIIUC

Instituto de Investigação Interdisciplinar

Molecular Biology & Genetics (41)

Title : A Machine Learning Approach for Hot-Spot Detection at Protein-Protein Interfaces
Author(s): Melo, R; Fieldhouse, R; Melo, A; Correia, JDG; Cordeiro, MNDS; Gumus, ZH; Costa, J; Bonvin, AMJJ; Moreira, IS
Source : INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES Document Type : Article Volume : 17 Issue: 8 Pages: - DOI: 10.3390/ijms17081215 Published: 2016 AUG
Times Cited: 2
 
Title : A New Folding Kinetic Mechanism for Human Transthyretin and the Influence of the Amyloidogenic V30M Mutation
Author(s): Jesus, CSH; Almeida, ZL; Vaz, DC; Faria, TQ; Brito, RMM
Source : INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES Document Type : Article Volume : 17 Issue: 9 Pages: - DOI: 10.3390/ijms17091428 Published: 2016 SEP
Times Cited: 0
 
Title : A Rab3a-dependent complex essential for lysosome positioning and plasma membrane repair
Author(s): Encarnocao, M; Espada, L; Escrevente, C; Mateus, D; Ramalho, J; Michelet, X; Santarino, I; Hsu, VW; Brenner, MB; Barral, D; Vieira, OV
Source : JOURNAL OF CELL BIOLOGY Document Type : Article Volume : 213 Issue: 6 Pages: 631-640 DOI: 10.1083/jcb.201511093 Published: 2016 JUN 20
Times Cited: 4
 
Title : A reference library of peripheral blood mononuclear cells for SWATH-MS analysis
Author(s): Silva, C; Santa, C; Anjo, SI; Manadas, B
Source : PROTEOMICS CLINICAL APPLICATIONS Document Type : Article Volume : 10 Issue: 7 Pages: 760-764 DOI: 10.1002/prca.201600070 Published: 2016 JUL
Times Cited: 2
 
Title : ALG1-CDG: Clinical and Molecular Characterization of 39 Unreported Patients
Author(s): Ng, BG; Shiryaev, SA; Rymen, D; Eklund, EA; Raymond, K; Kircher, M; Abdenur, JE; Alehan, F; Midro, AT; Bamshad, MJ; Barone, R; Berry, GT; Brumbaugh, JE; Buckingham, KJ; Clarkson, K; Cole, FS; O'Connor
Source : HUMAN MUTATION Document Type : Article Volume : 37 Issue: 7 Pages: 653-660 DOI: 10.1002/humu.22983 Published: 2016 JUL
Times Cited: 4
 
Title : Alteration in Phospholipidome Profile of Myoblast H9c2 Cell Line in a Model of Myocardium Starvation and Ischemia
Author(s): Sousa, B; Melo, T; Campos, A; Moreira, ASP; Maciel, E; Domingues, P; Carvalho, RP; Rodrigues, TR; Girao, H; Domingues, MRM
Source : JOURNAL OF CELLULAR PHYSIOLOGY Document Type : Article Volume : 231 Issue: 10 Pages: 2266-2274 DOI: 10.1002/jcp.25344 Published: 2016 OCT
Times Cited: 4
 
Title : Analysis of uni and bi-parental markers in mixture samples: Lessons from the 22nd GHEP-ISFG Intercomparison Exercise
Author(s): Toscanini, U; Gusmao, L; Narvaez, MCA; Alvarez, C; Baldassarri, L; Barbaro, A; Berardi, G; Hernandez, EB; Camargo, M; Carreras-Carbonell, J; Castro, J; Costa, SC; Coufalova, P; Dominguez, V; de Carval
Source : FORENSIC SCIENCE INTERNATIONAL-GENETICS Document Type : Article Volume : 25 Issue: Pages: 63-72 DOI: 10.1016/j.fsigen.2016.07.010 Published: 2016 NOV
Times Cited: 0
 
Title : Ascorbic acid and colon cancer: an oxidative stimulus to cell death depending on cell profile
Author(s): Pires, AS; Marques, CR; Encarnacao, JC; Abrantes, AM; Mamede, AC; Laranjo, M; Goncalves, AC; Sarmento-Ribeiro, AB; Botelho, MF
Source : EUROPEAN JOURNAL OF CELL BIOLOGY Document Type : Article Volume : 95 Issue: 6-7 Pages: 208-218 DOI: 10.1016/j.ejcb.2016.04.001 Published: 2016 JUN-JUL
Times Cited: 2
 
Title : Assessing genotype-phenotype associations in three dorsal colour morphs in the meadow spittlebug Philaenus spumarius (L.) (Hemiptera: Aphrophoridae) using genomic and transcriptomic resources
Author(s): Rodrigues, ASB; Silva, SE; Pina-Martins, F; Loureiro, J; Castro, M; Gharbi, K; Johnson, KP; Dietrich, CH; Borges, PAV; Quartau, JA; Jiggins, CD; Paulo, OS; Seabra, SG
Source : BMC GENETICS Document Type : Article Volume : 17 Issue: Pages: - DOI: 10.1186/s12863-016-0455-5 Published: 2016 NOV 15
Times Cited: 0
 
Title : Ataxin-3 phosphorylation decreases neuronal defects in spinocerebellar ataxia type 3 models
Author(s): Matos, CA; Nobrega, C; Louros, SR; Almeida, B; Ferreiro, E; Valero, J; de Almeida, LP; Macedo-Ribeiro, S; Carvalho, AL
Source : JOURNAL OF CELL BIOLOGY Document Type : Article Volume : 212 Issue: 4 Pages: 465-480 DOI: 10.1083/jcb.201506025 Published: 2016 FEB 15
Times Cited: 4
 
Title : Caloric restriction stimulates autophagy in rat cortical neurons through neuropeptide Y and ghrelin receptors activation
Author(s): Ferreira-Marques, M; Aveleira, CA; Carmo-Silva, S; Botelho, M; de Almeida, LP; Cavadas, C
Source : AGING-US Document Type : Article Volume : 8 Issue: 7 Pages: 1470-1484 DOI: 10.18632/aging.100996 Published: 2016 JUL
Times Cited: 2
 
Title : CanisOme - The protein signatures of Canis lupus familiaris diseases
Author(s): Fernandes, M; Rosa, N; Esteves, E; Correia, MJ; Arrais, J; Ribeiro, P; Vala, H; Barros, M
Source : JOURNAL OF PROTEOMICS Document Type : Article Volume : 136 Issue: Pages: 193-201 DOI: 10.1016/j.jprot.2016.01.005 Published: 2016 MAY 16
Times Cited: 3
 
Title : CCDC115 Deficiency Causes a Disorder of Golgi Homeostasis with Abnormal Protein Glycosylation
Author(s): Jansen, JC; Cirak, S; van Scherpenzeel, M; Timal, S; Reunert, J; Rust, S; Perez, B; Vicogne, D; Krawitz, P; Wada, Y; Ashikov, A; Perez-Cerda, C; Medrano, C; Arnoldy, A; Hoischen, A; Huijben, K; Steenb
Source : AMERICAN JOURNAL OF HUMAN GENETICS Document Type : Article Volume : 98 Issue: 2 Pages: 310-321 DOI: 10.1016/j.ajhg.2015.12.010 Published: 2016 FEB 4
Times Cited: 6
 
Title : Classification of ictal and seizure-free HRV signals with focus on lateralization of epilepsy
Author(s): Behbahani, S; Dabanloo, NJ; Nasrabadi, AM; Dourado, A
Source : TECHNOLOGY AND HEALTH CARE Document Type : Article Volume : 24 Issue: 1 Pages: 43-56 DOI: 10.3233/THC-151072 Published: 2016
Times Cited: 1
 
Title : Computational Discovery of Putative Leads for Drug Repositioning through Drug-Target Interaction Prediction
Author(s): Coelho, ED; Arrais, JP; Oliveira, JL
Source : PLOS COMPUTATIONAL BIOLOGY Document Type : Article Volume : 12 Issue: 11 Pages: - DOI: 10.1371/journal.pcbi.1005219 Published: 2016 NOV
Times Cited: 1
 
Title : Cross-Talk Between Human Tenocytes and Bone Marrow Stromal Cells Potentiates Extracellular Matrix Remodeling In Vitro
Author(s): Ekwueme, EC; Shah, JV; Mohiuddin, M; Ghebes, CA; Crispim, JF; Saris, DBF; Fernandes, HAM; Freeman, JW
Source : JOURNAL OF CELLULAR BIOCHEMISTRY Document Type : Article Volume : 117 Issue: 3 Pages: 684-693 DOI: 10.1002/jcb.25353 Published: 2016 MAR
Times Cited: 0
 
Title : Drug screening on Hutchinson Gilford progeria pluripotent stem cells reveals aminopyrimidines as new modulators of farnesylation
Author(s): Blondel, S; Egesipe, AL; Picardi, P; Jaskowiak, AL; Notarnicola, M; Ragot, J; Tournois, J; Le Corf, A; Brinon, B; Poydenot, P; Georges, P; Navarro, C; Pitrez, PR; Ferreira, L; Bollot, G; Bauvais, C; L
Source : CELL DEATH & DISEASE Document Type : Article Volume : 7 Issue: Pages: - DOI: 10.1038/cddis.2015.374 Published: 2016 FEB
Times Cited: 3
 
Title : Frailty in mouse ageing: A conceptual approach
Author(s): von Zglinicki, T; Nieto, IV; Brites, D; Karagianni, N; Ortolano, S; Georgopoulos, S; Cardoso, AL; Novella, S; Lepperdinger, G; Trendelenburg, AU; van Os, R
Source : MECHANISMS OF AGEING AND DEVELOPMENT Document Type : Article Volume : 160 Issue: Pages: 34-40 DOI: 10.1016/j.mad.2016.07.004 Published: 2016 DEC
Times Cited: 0
 
Title : Gallium-68 Complexes Conjugated to Pittsburgh Compound B: Radiolabeling and Biological Evaluation
Author(s): Cressier, D; Dhilly, M; Pham, TTC; Fillesoye, F; Gourand, F; Maiza, A; Martins, AF; Morfin, JF; Geraldes, CFGC; Toth, E; Barre, L
Source : MOLECULAR IMAGING AND BIOLOGY Document Type : Article Volume : 18 Issue: 3 Pages: 334-343 DOI: 10.1007/s11307-015-0906-9 Published: 2016 JUN
Times Cited: 1
 
Title : Genetically induced impairment of retinal ganglion cells at the axonal level is linked to extrastriate cortical plasticity
Author(s): Mateus, C; d'Almeida, OC; Reis, A; Silva, E; Castelo-Branco, M
Source : BRAIN STRUCTURE & FUNCTION Document Type : Article Volume : 221 Issue: 3 Pages: 1767-1780 DOI: 10.1007/s00429-015-1002-2 Published: 2016 APR
Times Cited: 1
 
Title : Genome sequence of the organohalide-respiring Dehalogenimonas alkenigignens type strain (IP3-3(T))
Author(s): Key, TA; Richmond, DP; Bowman, KS; Cho, YJ; Chun, J; da Costa, MS; Rainey, FA; Moe, WM
Source : STANDARDS IN GENOMIC SCIENCES Document Type : Article Volume : 11 Issue: Pages: - DOI: 10.1186/s40793-016-0165-7 Published: 2016 JUN 23
Times Cited: 0
 
Title : GHEP-ISFG collaborative simulated exercise for DVI/MPI: Lessons learned about large-scale profile database comparisons
Author(s): Vullo, CM; Romero, M; Catelli, L; Sakic, M; Saragoni, VG; Pleguezuelos, MJJ; Romanini, C; Porto, MJA; Prieto, JP; Castro, AB; Hernandez, A; Farfan, MJ; Prieto, V; Alvarez, D; Penacino, G; Zabalza, S;
Source : FORENSIC SCIENCE INTERNATIONAL-GENETICS Document Type : Article Volume : 21 Issue: Pages: 45-53 DOI: 10.1016/j.fsigen.2015.11.004 Published: 2016 MAR
Times Cited: 0
 
Title : Hematopoietic Reprogramming In Vitro Informs In Vivo Identification of Hemogenic Precursors to Definitive Hematopoietic Stem Cells
Author(s): Pereira, CF; Chang, B; Gomes, A; Bernitz, J; Papatsenko, D; Niu, XH; Swiers, G; Azzoni, E; de Bruijn, MFTR; Schaniel, C; Lemischka, IR; Moore, KA
Source : DEVELOPMENTAL CELL Document Type : Article Volume : 36 Issue: 5 Pages: 525-539 DOI: 10.1016/j.devcel.2016.02.011 Published: 2016 MAR 7
Times Cited: 10
 
Title : Methodology for single nucleotide polymorphism selection in promoter regions for clinical use. An example of its applicability
Author(s): Marques, H; Freitas, J; Medeiros, R; Longatto, A
Source : INTERNATIONAL JOURNAL OF MOLECULAR EPIDEMIOLOGY AND GENETICS Document Type : Article Volume : 7 Issue: 3 Pages: 126-+ DOI: Published: 2016
Times Cited: 0
 
Title : Mitochondrial Biogenesis and Proteome Remodeling Promote One-Carbon Metabolism for T Cell Activation
Author(s): Ron-Harel, N; Santos, D; Ghergurovich, JM; Sage, PT; Reddy, A; Lovitch, SB; Dephoure, N; Satterstrom, FK; Sheffer, M; Spinelli, JB; Gygi, S; Rabinowitz, JD; Sharpe, AH; Haigis, MC
Source : Cell Metabolism Document Type : Article Volume : 24 Issue: 1 Pages: 104-117 DOI: 10.1016/j.cmet.2016.06.007 Published: 2016 JUL 12
Times Cited: 13
 
Title : Newborn Urinary Metabolic Signatures of Prematurity and Other Disorders: A Case Control Study
Author(s): Diaz, SO; Pinto, J; Barros, AS; Morais, E; Duarte, D; Negrao, F; Pita, C; Almeida, MD; Carreira, IM; Spraul, M; Gil, AM
Source : JOURNAL OF PROTEOME RESEARCH Document Type : Article Volume : 15 Issue: 1 Pages: 311-325 DOI: 10.1021/acs.jproteome.5b00977 Published: 2016 JAN
Times Cited: 2
 
Title : On the contribution of Angola to the initial spread of HIV-1
Author(s): Pineda-Pena, AC; Varanda, J; Sousa, JD; Theys, K; Brtolo, I; Leitner, T; Taveira, N; Vandamme, AM; Abecasis, AB
Source : INFECTION GENETICS AND EVOLUTION Document Type : Article Volume : 46 Issue: Pages: 219-222 DOI: 10.1016/j.meegid.2016.08.009 Published: 2016 DEC
Times Cited: 0
 
Title : Osteosarcoma Stem Cells Have Active Wnt/beta-catenin and Overexpress SOX2 and KLF4
Author(s): Martins-Neves, SR; Corver, WE; Paiva-Oliveira, DI; Van den Akker, BEWM; Briaire-De-Bruijn, IH; Bovee, JVMG; Gomes, CMF; Cleton-Jansen, AM
Source : JOURNAL OF CELLULAR PHYSIOLOGY Document Type : Article Volume : 231 Issue: 4 Pages: 876-886 DOI: 10.1002/jcp.25179 Published: 2016 APR
Times Cited: 10
 
Title : Phospholipidomic Profile Variation on THP-1 Cells Exposed to Skin or Respiratory Sensitizers and Respiratory Irriant
Author(s): Martins, JD; Maciel, EA; Silva, A; Ferreira, I; Ricardo, F; Domingues, P; Neves, BM; Domingues, MRM; Cruz, MT
Source : JOURNAL OF CELLULAR PHYSIOLOGY Document Type : Article Volume : 231 Issue: 12 Pages: 2639-2651 DOI: 10.1002/jcp.25365 Published: 2016 DEC
Times Cited: 0
 
Title : Prediction of epileptic seizures based on heart rate variability
Author(s): Behbahani, S; Dabanloo, NJ; Nasrabadi, AM; Dourado, A
Source : TECHNOLOGY AND HEALTH CARE Document Type : Article Volume : 24 Issue: 6 Pages: 795-810 DOI: 10.3233/THC-161225 Published: 2016
Times Cited: 0
 
Title : Pro-oxidant and Antioxidant Effects in Photodynamic Therapy: Cells Recognise that Not All Exogenous ROS Are Alike
Author(s): Soares, HT; Campos, JRS; Gomes-da-Silva, LC; Schaberle, FA; Dabrowski, JM; Arnaut, LG
Source : CHEMBIOCHEM Document Type : Article Volume : 17 Issue: 9 Pages: 836-842 DOI: 10.1002/cbic.201500573 Published: 2016 MAY 3
Times Cited: 4
 
Title : Protein markers of Bursaphelenchus xylophilus Steiner & Buhrer, 1934 (Nickle, 1970) populations using quantitative proteomics and character compatibility
Author(s): Ciordia, S; Robertson, L; Arcos, SC; Gonzalez, MR; Mena, MD; Zamora, P; Vieira, P; Abrantes, I; Mota, M; Castagnone-Sereno, P; Navas, A
Source : PROTEOMICS Document Type : Article Volume : 16 Issue: 6 Pages: 1006-1014 DOI: 10.1002/pmic.201500106 Published: 2016 MAR
Times Cited: 0
 
Title : Protein precipitation of diluted samples in SDS-containing buffer with acetone leads to higher protein recovery and reproducibility in comparison with TCA/acetone approach
Author(s): Santa, C; Anjo, SI; Manadas, B
Source : PROTEOMICS Document Type : Article Volume : 16 Issue: 13 Pages: 1847-1851 DOI: 10.1002/pmic.201600024 Published: 2016 JUL
Times Cited: 2
 
Title : Regulation of Ca2+ channels by SNAP-25 via recruitment of syntaxin-1 from plasma membrane clusters
Author(s): Toft-Bertelsen, TL; Ziomkiewicz, I; Houy, S; Pinheiro, PS; Sorensen, JB
Source : MOLECULAR BIOLOGY OF THE CELL Document Type : Article Volume : 27 Issue: 21 Pages: 3329-3341 DOI: 10.1091/mbc.E16-03-0184 Published: 2016 NOV 1
Times Cited: 0
 
Title : Resistance to Recombinant Human Erythropoietin Therapy in a Rat Model of Chronic Kidney Disease Associated Anemia
Author(s): Garrido, P; Ribeiro, S; Fernandes, J; Vala, H; Rocha-Pereira, P; Bronze-da-Rocha, E; Belo, L; Costa, E; Santos-Silva, A; Reis, F
Source : INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES Document Type : Article Volume : 17 Issue: 1 Pages: - DOI: 10.3390/ijms17010028 Published: 2016 JAN
Times Cited: 1
 
Title : RGMB and neogenin control cell differentiation in the developing olfactory epithelium
Author(s): Kam, JWK; Dumontier, E; Baim, C; Brignall, AC; da Silva, DM; Cowan, M; Kennedy, TE; Cloutier, JF
Source : DEVELOPMENT Document Type : Article Volume : 143 Issue: 9 Pages: 1534-1546 DOI: 10.1242/dev.118638 Published: 2016 MAY 1
Times Cited: 4
 
Title : Structure of the rat tracheal mucosa after chronic intermittent hypoxia or chronic hyperbaric oxygen therapy
Author(s): Vera-Cruz, P; Rito, M; Diogo, L; Zagalo, C; dos Santos, JM; Monteiro, ME
Source : HISTOLOGY AND HISTOPATHOLOGY Document Type : Article Volume : 31 Issue: 6 Pages: 657-662 DOI: 10.14670/HH-11-703 Published: 2016 JUN
Times Cited: 0
 
Title : The Evolution of Haploid Chromosome Numbers in the Sunflower Family
Author(s): Mota, L; Torices, R; Loureiro, J
Source : GENOME BIOLOGY AND EVOLUTION Document Type : Article Volume : 8 Issue: 11 Pages: 3516-3528 DOI: 10.1093/gbe/evw251 Published: 2016 NOV
Times Cited: 0
 
Title : The oncolytic compound LTX-401 targets the Golgi apparatus
Author(s): Zhou, H; Sauvat, A; Gomes-da-Silva, LC; Durand, S; Forveille, S; Iribarren, K; Yamazaki, T; Souquere, S; Bezu, L; Muller, K; Leduc, M; Liu, P; Zhao, LW; Marabelle, A; Zitvogel, L; Rekdal, O; Kepp, O;
Source : CELL DEATH AND DIFFERENTIATION Document Type : Article Volume : 23 Issue: 12 Pages: 2031-2041 DOI: 10.1038/cdd.2016.86 Published: 2016 DEC
Times Cited: 0
 
Title : The proteasome controls presynaptic differentiation through modulation of an on-site pool of polyubiquitinated conjugates
Author(s): Pinto, MJ; Alves, PL; Martins, L; Pedro, JR; Ryu, HR; Jeon, NL; Taylor, AM; Almeida, RD
Source : JOURNAL OF CELL BIOLOGY Document Type : Article Volume : 212 Issue: 7 Pages: 789-801 DOI: 10.1083/jcb.201509039 Published: 2016 MAR 28
Times Cited: 5
 
Title : Tumor protein Tctp regulates axon development in the embryonic visual system
Author(s): Roque, CG; Wong, HHW; Lin, JQ; Holt, CE
Source : DEVELOPMENT Document Type : Article Volume : 143 Issue: 7 Pages: 1134-1148 DOI: 10.1242/dev.131060 Published: 2016 APR 1
Times Cited: 2