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LCM Laboratory for Computational Mathematics

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Publications

Here is a list of the articles in international journal or technical reports done in the scope of the research projects at LCM.

2024

  • BARBEIRO, Sílvia, HENRIQUES, Rafael, SANTOS, José Luis. A quadratic optimization program for the inverse elastography problem (preprint).

  • BARBEIRO, Sílvia, HENRIQUES, Rafael, SANTOS, José Luis. The derivative free trust-region method for the inverse elastography problem (preprint).

  • BARBEIRO, Sílvia, HENRIQUES, Rafael, SANTOS, José Luis. A quadratic optimization program for the inverse elastography problem. Journal of Mathematics in Industry. Vol. 14, Article number 18, pp. 1-20.

  • CANDIANI, M., MALUCELLI, Federico, PASCOAL, Marta, SCHETTINI, T.. Optimizing the integration of express bus services with micro-mobility: a case study. Transportation Research Procedia 78 (2024) 289-296.

  • CIALLELLA, Mirco, CLAIN, Stéphane, GABURRO, Elena, RICCHIUTO, Mario. Very high order treatment of embedded curved boundaries in compressible flows: ADER discontinuous Galerkin with a space-time Reconstruction for Off-site data. Computers & Mathematics with Applications. Vol. 75, pp. 1-18.

  • CLAIN, Stéphane, FIGUEIREDO, J.. Stencil and kernel optimisation for mesh-free very high-order generalised finite difference method. Mathematics and Computers in Simulation. Vol. 218, pp. 49-78.

  • CLAIN, Stéphane, LOPES, Diogo, PEREIRA, Rui M.S., PEREIRA, Paulo A.. Very high-order finite difference method on arbitrary geometries with Cartesian grids for non-linear convection diffusion reaction equations. Journal of Computational Physics. Vol. 498, Article number 11266, pp. 1-28.

  • COELHO, Catarina, SANTOS, José Luis, JÚDICE, Pedro. The performance of bank portfolio optimization. International Transactions in Operational Research. Vol. 31, pp. 1-28.

  • FERREIRA, José Augusto, PENA, Gonçalo. FDM/FEM for nonlinear convection-diffusion-reaction equations with Neumann boundary conditions-convergence analysis for smooth and nonsmooth solutions. Journal of Computational and Applied Mathematics. Vol. 446, Article number 115866, pp. 1-20.

  • FERREIRA, José Augusto, GÓMEZ, Hugo Peña, PINTO, Luís. Numerical analysis of light-controlled drug delivery systems. Journal of Computational and Applied Mathematics. Vol. 447, Article number 115862, pp. 1-15.

  • ERREIRA, Marina A., LUKKARINEN, Jani, NOTA, Alessia, VELÁZQUEZ, Juan J. L.. Nonpower law constant flux solutions for the Smoluchowski coagulation equation. SIAM Journal of Mathematical Analysis. Vol. 56. 3, pp. 2783-2817.

  • FERREIRA, José Augusto, OLIVEIRA, Paula de, SILVA, Pascoal da. Respiratory particles: from analytical estimates to disease transmission. Journal of Mathematics in Industry. Vol. 14. Article number 1, pp. 1-22.

  • GRIFFITH, Matthew, ARAÚJO, Adérito, TRAVASSO, Rui, SALVADOR, Armindo. The architecture of redox microdomains: Cascading gradients and peroxiredoxins' redox-oligomeric coupling integrate redox signaling and antioxidant protection. Redox Biology. Vol. 69. Article number 103000, pp. 1-14.

  • NHANGUMBE, Clarinda, SOUSA, Ercília. Numerical solutions of an option pricing rainfall weather derivatives model. Computers & Mathematics with Applications. Vol. 153, pp. 43-55.

  • REIS, Cláudia, BARBOSA, André M., BAPTISTA, Maria Ana, LOPES, Mário, CLAIN, Stéphane. A numerical methodology for estimating site-specific cascading earthquake and tsunami dynamic loading on critical infrastructure. International Journal of Disaster Risk Reduction. Vol. 100, Article number 104163, pp. 1-24.

  • SANTOS, Milene, ARAÚJO, Adérito, BARBEIRO, Sílvia, CLAIN, Stéphane, COSTA, Ricardo, MACHADO, Gaspar J.. Very high-order accurate discontinuous Galerkin method for curved boundaries with polygonal meshes. Journal of Scientific Computing . Vol. 100, Article number 66, pp. 1-47.

2023

  • ARAÚJO, Adérito, CERDEIRA, Jorge, COSTA E SILVA, Eliana, LOPES, Nuno, MOURA, Ana. Optimal configuration for communication antenna along a railway line. Mathematics in Industry Reports, Cambridge Open Engage Preprint.
  • AZHDARI, Ebrahim , EMAMI, Aram, FERREIRA, José Augusto. Drug delivery to the anterior segment of the eye enhanced by ultrasound- modeling and simulation. Computers & Mathematics with Applications. Vol. 144, pp. 51-61.
  • Bandeira, D. and Pascoal,  Bimaterial Three-Dimensional Printing Using Digital Light Processing Projectors. In: Almeida, J.P., Alvelos, F.P.e., Cerdeira, J.O., Moniz, S., Requejo, C. (eds) Operational Research. APDIO 2022. Springer Proceedings in Mathematics & Statistics, vol 437. Springer, Cham.
  • BATISTA, Ana, SERRANHO, Pedro, SANTOS, Mário J., CORREIA, Carlos, DOMINGUES, José P., LOUREIRO, Custódio, CARDOSO, João M. R., BARBEIRO, Sílvia, MORGADO, Miguel, BERNARDES, Rui. Phase-resolved optical coherence elastography: an insight into tissue displacement estimation. Sensors. Vol. 23. 8, pp. 1-14.
  • CORREIA, Carlos, BATISTA, Ana, BARBEIRO, Sílvia, CARDOSO, João M. R., DOMINGUES, José P., HENRIQUES, Rafael, LOUREIRO, Custódio, SANTOS, Mário J., SERRANHO, Pedro, BERNARDES, Rui, MORGADO, Miguel. Time-dependent elastic numerical model for Optical Coherence Elastography of the murine retina.
  • FERREIRA, José Augusto, GÓMEZ, Hugo Peña, PINTO, Luís. A numerical scheme for a partial differential system motivated by light-triggered drug delivery. Applied Numerical Mathematics. Vol. 184, pp. 101-120.
  • FERREIRA, José Augusto, OLIVEIRA, Paula de, SILVA, Pascoal da, SILVA, Rufino. New pathways for drug and gene delivery to the eye: A mathematical model. Applied Mathematical Modelling. Vol. 116, pp. 695-710.
  • FERREIRA, José Augusto, GÓMEZ, Hugo Peña, PINTO, Luís. Numerical simulation and validation of a nonlinear differential system for drug release boosted by light. Pinto, C.M., Ionescu, C.M. (eds) (Eds.), Computational and Mathematical Models in Biology. (pp. 305-325). Cham: Springer.
  • GÓMEZ, Hugo Peña. Coupling light propagation and diffusion in drug delivery: a mathematical approach. PhD Thesis. University of Coimbra.
  • GRIFFITH, Matthew, ARAÚJO, Adérito, TRAVASSO, Rui, SALVADOR, Armindo. Spatially localized redox relays allow sensitive site-specific hydrogen peroxide signaling. Free Radical Biology and Medicine. Vol. 208. Supplement 1, pp. S29-S30.
  • PLUNDER, Steffen, DANESIN, Cathy, GLISE, Bruno, FERREIRA, Marina A., MERINO ACEITUNO, Sara, THEVENEAU, Eric. Modelling variability and heterogeneity of EMT scenarios highlights nuclear positioning and protrusions as main drivers of extrusion. bioRxiv: 10.1101/2023.11.17.567510 Preprint.
  • REIS, Cláudia, CLAIN, Stéphane, BARBOSA, André M.. Matemática aplicada à gestão de risco costeiro. Gazeta de Matemática. Vol. 200, pp. 42-50.
  • SALVADOR, Armindo, GRIFFITH, Matthew, ARAÚJO, Adérito, TRAVASSO, Rui. How sensitive and site-specific hydrogen peroxide signaling can be achieved in human cells: spatially localized redox relays. In: European Biophysics Journal, Special Issue, 14th EBSA congress, S205.

2022

  • AGUIAR, Ana, FERNANDES, Paulo, GUERREIRO, Andreia P., TOMÁS, Ricardo, AGNELO, João, SANTOS, José Luis, ARAÚJO, Filipe, COELHO, Margarida C., FONSECA, Carlos M., D'OREY, Pedro M., LUÍS, Miguel, SARGENTO, Susana. MobiWise: Eco-routing decision support leveraging the Internet of Things. Sustainable Cities and Society. Vol. 87. Article number 104180, pp. 1-16.
  • ARAÚJO, Adérito, BARBEIRO, Sílvia, BERNARDES, Rui, MORGADO, Miguel, SAKIC, Sunsica. A mathematical model for the corneal transparency problem. Journal of Mathematics in Industry . Vol. 12. Article number 10, pp. 1-11.
  • ARAÚJO, Adérito, BARBEIRO, Sílvia, SANTOS, Milene. On the Helmholtz's equation model for light propagation in the cornea. Proceedings of the 2nd International Conference on Image Processing and Vision Engineering - Imaging4OND, pp. 265-268.
  • BARBEIRO, Sílvia, ENGUIÇA, Ricardo, LOBO, Diogo. Automatic generation of conformal cooling channels in injection moulding. Computer-Aided Design. Vol. 150. Article number 103312, pp. 1-10.
  • BATISTA, Ana, CORREIA, Carlos, BARBEIRO, Sílvia, CARDOSO, João M. R., DOMINGUES, José P., HENRIQUES, Rafael, LOUREIRO, Custódio, SANTOS, Mário J., SERRANHO, Pedro, BERNARDES, Rui, MORGADO, Miguel. Swept-source phase-stabilized optical coherence tomography setup for elastography.  Proceedings of the 2nd International Conference on Image Processing and Vision Engineering - Imaging4OND, pp. 269-274.
  • CAMPOS, G. C. M., FERREIRA, José Augusto, ROMANAZZI, Giuseppe. Density-pressure IBVP: Numerical analysis, simulation and cell dynamics in a colonic crypt. Applied Mathematics and Computation. Vol. 424. Article number 127037, pp. 1-22.
  • CASSIA, Antonio, JABALI, Ola, MALUCELLI, Federico, PASCOAL, Marta, (2022). The electric vehicle shortest path problem with time windows and prize collection. in: 17th Conference on Computer Science and Intelligence Systems, pp. 1-10.
  • FERREIRA, José Augusto, GÓMEZ, Hugo Peña, PINTO, Luís. A mathematical model for NIR light protocol optimization in controlled transdermal drug delivery. Applied Mathematical Modelling. Vol. 112, pp. 1-17.
  • FERREIRA, José Augusto, JORDÃO, Daniela, PINTO, Luís. Drug delivery enhanced by ultrasound: Mathematical modeling and simulation. Computers & Mathematics with Applications. Vol. 107, pp. 57-69.
  • FERREIRA, José Augusto, PINTO, Luís, SANTOS, Rafael F.. Numerical analysis of a porous-elastic model for convection enhanced drug delivery. Journal of Computational and Applied Mathematics. Vol. 399. Article number 113719, pp. 1-19.
  • LIU, Suyun, VICENTE, Luís Nunes. Accuracy and fairness trade-offs in machine learning: A stochastic multi-objective approach. Computational Management Science. Vol. 19, pp. 513-537.
  • RAMOS, Bruna, PINHO, Diana, MARTINS, Daniela, VAZ, A. Ismael F. , VICENTE, Luís Nunes. Optimal 3D printing of complex objects in a 5-axis printer. Optimization and Engineering. Vol. 23, pp. 1085-1116.
  • SERRANHO, Pedro, BARBEIRO, Sílvia, HENRIQUES, Rafael, BATISTA, Ana, SANTOS, Mário J., CORREIA, Carlos, DOMINGUES, José P., LOUREIRO, Custódio, CARDOSO, João M. R., BERNARDES, Rui, MORGADO, Miguel. On the numerical solution of the inverse elastography problem for time-harmonic excitation.

2021

  • ANDRIOLO, Umberto, GONÇALVES, Gil R., RANGEL-BUITRAGO, Nelson, PATERNI, Marco, BESSA, Filipa, GONÇALVES, Maria Luisa, SOBRAL, Paula, BINI, Monica, DUARTE, Diogo, FONTÁN-BOUZAS, Ángela, GONÇALVES, Diogo, KATAOKA, Tomoya, LUPPICHINI, Marco, PINTO, Luís, TOPOUZELOS, Konstantinos, VÉLEZ-MENDOZA, Anubis, MERLINO, Silvia. Drones for litter mapping: An inter-operator concordance test in marking beached items on aerial images. Marine Pollution Bulletin. Vol. 169. Article number 112542, pp. 1-11.
  • BORGES, J. S., FERREIRA, José Augusto, ROMANAZZI, Giuseppe, ABREU, E.. Drug release from viscoelastic polymeric matrices- a stable and supraconvergent FDM. Computers & Mathematics with Applications. Vol. 99, pp. 257-269.
  • CARVALHO, Sara. PhD Thesis. Stable and convergent numerical methods for nonlinear parabolic systems: application to sunspots. University of Coimbra.
  • FERREIRA, José Augusto, OLIVEIRA, Paula de, PENA, Gonçalo, SILVEIRA, Elisa. Coupling nonlinear electric fields and temperature to enhance drug transport: an accurate numerical tool. Journal of Computational and Applied Mathematics. Vol. 384. Article number 113127, pp. 1-23.
  • FERREIRA, José Augusto, OLIVEIRA, Paula de, SILVA, Pascoal da, GRASSI, Mario. From life-saving to life-threatening: A mathematical model to simulate bacterial infections in surgical procedures. SIAM Journal on Applied Mathematics. Vol. 81. 3, pp. 1226-1247.
  • GIDDENS, Spencer, GOMES, Marco A. C., Vilela, João P., SANTOS, José Luis, HARRISON, Willie K.. Enumeration of the degree distribution space for finite block length LDPC codes.
  • JÚDICE, Pedro, PINTO, Luís, SANTOS, José Luis. Bank strategic asset allocation under a unified risk measure. Expert Systems with Applications. Vol. 185. Article number 115574, pp. 1-16.
  • LIU, Suyun, VICENTE, Luís Nunes. The stochastic multi-gradient algorithm for multi-objective optimization and its application to supervised machine learning. Annals of Operations Research, pp. 1-30.
  • MARTINS, Paula, PIRES, António, SANTOS, José Luis, SENA, Cristina, SEIÇA, Raquel. Atherosclerotic process in seroreverter children and adolescents ex-posed to fetal antiretroviral therapy. Current HIV Research. Vol. 19. 3, pp. 216-224.
  • MICHELETTI, Alessandra, ARAÚJO, Adérito, BUDKO, Neil, CARPIO, Ana, EHRHARDT, Matthias, (Eds.). Mathematical models of the spread and consequences of the SARS-CoV-2 pandemics: Effects on health, society, industry, economics and technology. [Special Issue]. Journal of Mathematics in Industry. Vol. 11.
  • OLIVEIRA, Marina, ARAÚJO, Helder, FIGUEIREDO, Isabel N., PINTO, Luís, CURTO, Eva, PERDIGOTO, Luís. Registration of consecutive frames from wireless capsule endoscopy for 3D motion estimation. IEEE Access. Vol. 9, pp. 119533-119545.
  • SANTOS, José Luis. Traveling salesman problem in a Geographic Information Management System. In: Progress in Industrial Mathematics: Success Stories, pp. 131-144.

2020

  • AZHDARI, Ebrahim , EMAMI, Aram, FERREIRA, José Augusto. Drug release from a surface erosion biodegradable viscoelastic polymeric platform: Analysis and numerical simulation. Computers & Mathematics with Applications. Vol. 80. 12, pp. 3004-3026.
  • D. Bandeira, M. Pascoal and B. Santos, Bimaterial 3D printing using galvanometer scanners, Optimization and Engineering 21 (2020) 49-72.
  • BANDEIRA, Daniel, PASCOAL, Marta, MATEUS, Artur, and REIS SILVA, Miguel, Multi-material 3D printing using stereolithography: an optimization approach. Advanced Materials Research (in press).
  • BARBEIRO, Sílvia, LOBO, Diogo. Learning stable nonlinear cross-diffusion models for image restoration. Journal of Mathematical Imaging and Vision. Vol. 62. 2, pp. 223-237.
  • BARBEIRO, Sílvia, SERRANHO, Pedro, (2020). The method of fundamental solutions for the direct elastography problem in the human retina. In: Alves C., Karageorghis A., Leitão V., Valtchev S. (eds) Advances in Trefftz Methods and Their Applications. SEMA SIMAI Springer Series, vol 23. Springer, Cham, pp. 87-101.
  • BERNARDES, Rui, FERREIRA, José Augusto, GRASSI, Mario, NHANGUMBE, M., OLIVEIRA, Paula de. Fighting opportunistic bacteria in drug delivery medical devices. SIAM Journal on Applied Mathematics. Vol. 79. 6, pp. 2456-2478.
  • BRANCO, João, FERREIRA, José Augusto, OLIVEIRA, Paula de, PENA, Gonçalo. An eradication agent acting on a binary cell population model: mathematical analysis. Health and Technology. Vol. 10. 4, pp. 945-959.
  • CARVALHO, Sara, GOMES, S., BARATA, Teresa, LOURENCO, Ana, PEIXINHO, Nuno. Comparison of automatic methods to detect sunspots in the Coimbra Observatory spectroheliograms. Astronomy and Computing. Vol. 32. Article Number 100385, pp. 1-19.
  • EMAMI, Aram, AZHDARI, Ebrahim , FERREIRA, José Augusto, GHAFFARIPOUR, Anooshirvan. Drying viscoelastic materials: a non-Fickian approach. Computational & Applied Mathematics. Vol. 39. 2, Article number 125, pp. 1-19.
  • FERREIRA, José Augusto, OLIVEIRA, Paula de, PINTO, Luís. Aging effect on iontophoretic transdermal drug delivery. SIAM Journal on Applied Mathematics. Vol. 80. 4, pp. 1882-1907.
  • FERREIRA, José Augusto, OLIVEIRA, Paula de, SILVA, Pascoal da. Computational simulation of bacterial infectious in surgical procedures: an exploratory study.  In: Pinelas S., Graef J.R., Hilger S., Kloeden P., Schinas C. (eds) Differential and Difference Equations with Applications. ICDDEA 2019. Springer Proceedings in Mathematics & Statistics, vol 333. Springer, Cham, pp. 413-425.
  • FERREIRA, José Augusto, OLIVEIRA, Paula de, SILVEIRA, Elisa. Coupling the temperature with drug diffusion: a second order approximation. In: Pinelas S., Graef J.R., Hilger S., Kloeden P., Schinas C. (eds) Differential and Difference Equations with Applications. ICDDEA 2019. Springer Proceedings in Mathematics & Statistics, vol 333. Springer, Cham, pp. 427-440.
  • FERREIRA, José Augusto. Drug delivery from ophthalmic lenses. Lindner E., Micheletti A., Nunes C. (Eds.), Mathematical Modelling in Real Life Problems: Cases Studies from ECMI-Modelling. (pp. 59-70). Cham: Springer.
  • FERREIRA, José Augusto, OLIVEIRA, Paula de, SILVEIRA, Elisa. Drug release enhanced by temperature: an accurate discrete model for solutions in H^3. Computers & Mathematics with Applications. Vol. 79. 3, pp. 852-875.
  • FERREIRA, José Augusto, GONÇALVES, M. B., GUDIÑO, Elias, MAIA, M., OISHI, C. M.. Mathematical model for degradation and drug release from an intravitreal biodegradable implant. Computers & Mathematics with Applications. Vol. 80. 10, pp. 2212-2240.
  • FIGUEIREDO, Isabel N., DODANGEH, Mahdi, PINTO, Luís, FIGUEIREDO, Pedro N., TSAI, Richard. Fast colonic polyp detection using a Hamilton-Jacobi approach to non-dominated sorting. Biomedical Signal Processing and Control. Vol. 61. Article Number 102035, pp. 1-13.
  • FIGUEIREDO, Isabel N., PINTO, Luís, PERDIGOTO, Luís, OLIVEIRA, Marina, ARAÚJO, Helder, FIGUEIREDO, Pedro N.. Wireless capsule endoscope location and a robotic validation experiment. In: XV Mediterranean Conference on Medical and Biological Engineering and Computing - MEDICON 2019. IFMBE Proceedings, vol 76, pp. 1361-1365.
  • GONÇALVES, Gil R., ANDRIOLO, Umberto, PINTO, Luís, BESSA, Filipa. Mapping marine litter using UAS on a beach-dune system: a multidisciplinary approach. Science of the Total Environment. Vol. 706. Article number 135742, pp. 1-14.
  • GONÇALVES, Gil R., ANDRIOLO, Umberto, DUARTE, Diogo, PINTO, Luís. Mapping marine litter with Unmanned Aerial Systems: A showcase comparison among manual image screening and machine learning techniques. Marine Pollution Bulletin. Vol. 155. Article Number 111158, pp. 1-11.
  • JORDÃO, Daniela. PhD Thesis. Coupling hyperbolic and parabolic IBVP: applications to drug delivery. University of Coimbra.
  • MARTINS, Paula, PIRES, António, ALBUQUERQUE, M. Emanuel, OLIVEIRA-SANTOS, Manuel, SANTOS, José Luis, SENA, Cristina, SEIÇA, Raquel. Myocardial peak systolic velocity-a tool for cardiac screening of HIV-exposed uninfected children. European Journal of Pediatrics. Vol. 179. 3, pp. 395-404.
  • PASCOAL, Marta, CLÍMACO, João. On a relaxed maximally disjoint path pair problem: a bicriteria approach. International Transactions in Operational Research. Vol. 27. 4, pp. 2045-2063.
  • TORABI, Roham, GOMES, Alvaro, LOBO, Diogo, MORGADO-DIAS, Fernando. Modelling demand flexibility and energy storage to support increased penetration of renewable energy resources on Porto Santo. Greenhouse Gases Science and Technology. Vol. 10. 6, pp. 1118-1132.

2019

  • ANTONIOU, Efstathios N., ARAÚJO, Adérito, BUSTAMANTE, Miguel D., GIBALI, Aviv. Physically feasible decomposition of Engino® toy models: A graph-theoretic approach. European Journal of Applied Mathematics. Vol. 30. 2, pp. 278-297.
  • ANTUNES DO CARMO, J., FERREIRA, José Augusto, PINTO, Luís. On the accurate simulation of nearshore and dam break problems involving dispersive breaking waves. Wave Motion. Vol. 85, pp. 125-143.
  • Bandeira, D. and Pascoal, M., Modeling Bimaterial 3D Printing Using Galvanometer Mirror Scanners. In: Faragó, I., Izsák, F., Simon, P. (eds) Progress in Industrial Mathematics at ECMI 2018. Mathematics in Industry, vol 30. Springer, Cham.
  • BARBEIRO, Sílvia. Poroelasticity with deformation dependent permeability. In: Faragó I., Izsák F., Simon P. (eds) Progress in Industrial Mathematics at ECMI 2018. Mathematics in Industry, vol 30, pp. 389-395.
  • BARBEIRO, Sílvia, LOBO, Diogo. Improved PDE models for image restoration through backpropagation. DMUC 19-24 Preprint.
  • BERNARDES, Raquel, FERREIRA, José Augusto, GRASSI, Mario, NHANGUMBE, M., and OLIVEIRA, Paula de, Fighting opportunistic bacteria in drug delivery medical devices, SIAM Journal on Applied Mathematics 79 (2019) 2456-2478.
  • COELHO, Catarina, SANTOS, José Luis, JÚDICE, Pedro. A robust model for optimal bank asset structure. DMUC 19-06 Preprint.
  • FIGUEIREDO, Isabel N., LEAL, Carlos, ROMANAZZI, Giuseppe, ENGQUIST, Bjorn. Biomathematical model forsimulating abnormal orifice patterns in colonic crypts. Mathematical Biosciences. Vol. 315, pp. 1-11.
  • FIGUEIREDO, Isabel N., DODANGEH, Mahdi, PINTO, Luís, FIGUEIREDO, Pedro N., TSAI, Richard. Colonic polyp identification using Pareto depth anomaly detection algorithm. In: Tavares J., Natal Jorge R. (eds) VipIMAGE 2019. VipIMAGE 2019. Lecture Notes in Computational Vision and Biomechanics, vol 34, pp.3-11.
  • FIGUEIREDO, Pedro N., FIGUEIREDO, Isabel N., PINTO, Luís, KUMAR, Sunil, TSAI, Richard, MAMONOV, Alexander V.. Polyp detection with computer aided diagnosis in white light colonoscopy: comparison of three different methods. Endoscopy International Open. Vol. 7, pp. 209-215.
  • FIGUEIREDO, Isabel N., PINTO, Luís, FIGUEIREDO, Pedro N., TSAI, Richard, (2019). Unsupervised segmentation of colonic polyps in narrow-band imaging data based on manifold representation of images and Wasserstein distance. Biomedical Signal Processing and Control. Vol. 53, pp. 1-9.
  • LIU, Suyun, VICENTE, Luís Nunes. The stochastic multi-gradient algorithm for multi-objective optimization and its application to supervised machine learning. DMUC 19-46 Preprint.

    2018

    • A. Araújo, S. Barbeiro, M. Khaksar Galati, Convergence of an explicit iterative leap-frog discontinuous Galerkin method for time-domain Maxwell’s equations in anisotropic materials, Journal of Mathematics in Industry 8 (2018) Article number 9, pp. 1-16.

    • BARATA, Teresa, CARVALHO, Sara, DOROTOVIC, I., PINHEIRO, F. J. G., GARCIA, Adraina, FERNANDES, João M., LOURENÇO, A.M.. Software tool for automatic detection of solar plages in the Coimbra Observatory spectroheliograms. Astronomy and Computing. Vol. 24, pp. 70-83.

    • CHIARAPPA, Gianluca, DE'NOBILI, Maria D., ROJAS, Ana M., ABRAMI, Michela, LAPASIN, Romano, GRASSI, Gabriele, FERREIRA, José Augusto, GUDIÑO, Elias, OLIVEIRA, Paula de, GRASSI, Mario. Mathematical modeling of L-(+)-ascorbic acid delivery from pectin films (packaging) to agar hydrogel (food). Journal of Food Engineering. Vol. 234, pp. 73-81.

    • DODANGEH, Mahdi, FIGUEIREDO, Isabel N., GONÇALVES, Gil R., (2018). Spatially adaptive total variation deblurring with split Bregman technique. IET Image Processing. Vol. 12. 6, pp. 948-958.

    • FERREIRA, José Augusto, JORDÃO, Daniela, PINTO, Luís. Approximating coupled hyperbolic-parabolic systems arising in enhanced drug delivery. Computers & Mathematics with Applications. Vol. 76. 1, pp. 81-97.

    • FERREIRA, José Augusto, GRASSI, Mario, OLIVEIRA, Paula de, ROMANAZZI, Giuseppe. Drug release from viscoelastic swelling polymeric platforms. SIAM Journal on Applied Mathematics. Vol. 78. 3, pp. 1378-1401.  

    • FERREIRA, José Augusto, GONÇALVES, Lino, NAGHIPOOR, Jahed, OLIVEIRA, Paula de, RABCZUK, Timon, (2018). The effect of plaque eccentricity on blood hemodynamics and drug release in a stented artery. Medical Engineering & Physics. Vol. 60, pp. 47-60.

    • FERREIRA, José Augusto, OLIVEIRA, Paula de, SILVA, Pascoal da, SILVA, R., (2018). Toward a precision ophthalmology: targeting the retina. SIAM Journal on Applied Mathematics. Vol. 78. 6, pp. 2996-3023.

    • FIGUEIREDO, Isabel N., LEAL, Carlos, PINTO, Luís, FIGUEIREDO, Pedro N., TSAI, Richard. Hybrid multiscale affine and elastic image registration approach towards wireless capsule endoscope localization. Biomedical Signal Processing and Control. Vol. 39, pp. 486-502.

    • FIGUEIREDO, Isabel N., PINTO, Luís, GONÇALVES, Gil R., ENGQUIST, Bjorn. A variational model for image artifact correction based on Wasserstein distance.  In: Tavares J., Natal Jorge R. (eds) VipIMAGE 2017. ECCOMAS 2017. Lecture Notes in Computational Vision and Biomechanics, vol 27, pp. 43-51, 2018. Springer, Cham.

    • MOHAMMADIAN, Zahra, DEHGHANI, Mohammad Javad, ESLAMI, Mohsen, DODANGEH, Mahdi. Max‐min energy‐efficient subchannel assignment and power allocation in interference‐limited OFDMA heterogeneous networks with QoS guarantee. Transactions on Emerging Telecommunications Technologies. Vol. 29. 12, pp. 1-14.

    • PEREIRA, Sergio, VAZ, A. Ismael F. , VICENTE, Luís Nunes. On the optimal object orientation in additive manufacturing. The International Journal of Advanced Manufacturing Technology. Vol. 98. 5-8, pp. 1685-1694.  

    • Raquel Bernardes, J.A. Ferreira, M. Grassi, Paula de Oliveira and M. Nhangumbe,  Drug delivery from bimaterial orthopedic implants: a mathematical approach, Technical Report.

    • SANTOS, José Luis, SANTOS, Joni, FERREIRA, Manuel João Ferreira, ALVES, Nelson, GUEVARA, Miguel. Application of the two-stage one-dimensional cutting stock problem in the steel industry.

    2017

    • ARAÚJO, Adérito, BUSTAMANTE, Miguel D., CRUZ, Manuel, NOVAKOVIC, Rada, ROTTSCHAFER, Vivi. Handbook for running a sustainable European Study Group with Industry.

    • ARAÚJO, Adérito, BARBEIRO, Sílvia, CUESTA, Eduardo, DURÁN, Angel. A discrete cross-diffusion model for image restoration. In: Progress in Industrial Mathematics at ECMI 2016, Peregrina Quintela, Patricia Barral, Dolores Gómez, Francisco J. Pena, Jerónimo Rodríguez, Pilar Salgado & Miguel E. Vázquez-Mendéz (Eds.), ECMI book series of Mathematics in Industry vol. 26.

    • ARAÚJO, Adérito, BARBEIRO, Sílvia, CUESTA, Eduardo, DURÁN, Angel. Cross-diffusion systems for image processing: I. The linear case. Journal of Mathematical Imaging and Vision. Vol. 58. 3, pp. 447-467.

    • ARAÚJO, Adérito, BARBEIRO, Sílvia, CUESTA, Eduardo, DURÁN, Angel. Cross-diffusion systems for image processing: II. The nonlinear case. Journal of Mathematical Imaging and Vision. Vol. 58. 3, pp. 427-446.

    • CECCARELLI, Fulvia, SCIANDRONE, Marco, PERRICONE, Carlo, GALVAN, Giulio, MORELLI, Francesco, VICENTE, Luís Nunes, LECCESE, Ilaria, MASSARO, Laura, CIPRIANO, Enrica, SPINELLI, Francesca Romana, ALESSANDRI, Cristiano, VALESINI, Guido, CONTI, Fabrizio. Prediction of chronic damage in systemic lupus erythematosus by using machine learning models. PLoS ONE. Vol. 12. 3, pp. 1-13.

    • FERNANDES, Xavier, REBELO, Joana, GOUVEIA, João, MAIA, Rodrigo, SILVA, Nuno Bustorff. On-off scheduling schemes for power-constrained electric vehicle charging. 4OR-A Quartely Journal of Operations Research. Vol. 15. 2, pp. 163-181.

    • FERREIRA, José Augusto, OLIVEIRA, Paula de, SILVA, Pascoal da, SILVA, Rufino. Mathematics of aging: Diseases of the posterior segment of the eye. Computers & Mathematics with Applications. Vol. 73. 1, pp. 11-26.

    • FERREIRA, José Augusto, GONÇALVES, Lino, NAGHIPOOR, Jahed, OLIVEIRA, Paula de, RABCZUK, Timon. The influence of atherosclerotic plaques on the pharmacokinetics of a drug eluted from bioabsorbable stents. Mathematical Biosciences. Vol. 283, pp. 71-83.

    • FERREIRA, José Augusto, OLIVEIRA, Paula de, PENA, Gonçalo. Transdermal iontophoresis -A quantitative and qualitative study. Computers & Mathematics with Applications. Vol. 74. 10, pp. 2231-2242.

    • FIGUEIREDO, Isabel N., LEAL, Carlos, PINTO, Luís, FIGUEIREDO, Pedro N., TSAI, Richard. Dissimilarity measure of consecutive frames in wireless capsule endoscope videos: a way of searching for abnormalities. In: Computer-Based Medical Systems (30th IEEE International Symposium on Computer Based Medical Systems 2017), pp. 702-707.

    • NHANGUMBE, M., GOUVEIA, João, SOUSA, Ercília, BELBUT, M., MATEUS, Artur. Geometric study of surface finishing of selective laser melting moulds. Procedia Manufacturing. Vol. 12, pp. 174-182.

    • PONTRELLI, Giuseppe, LAURICELLA, Marco, FERREIRA, José Augusto, PENA, Gonçalo. Iontophoretic transdermal drug delivery: a multi-layered approach. Mathematical Medicine and Biology - A Journal of the IMA. Vol. 34. 4, pp. 559-576.

     2016

      2015

        2014

        • A. Correia, L. Pinto, A. Araújo, S. Barbeiro, F. Caramelo, P. Menezes, M. Morgado, P. Serranho and R. Bernardes, Monte Carlo simulation of diabetic macular edema changes on optical coherence tomography data, 2014 IEEE-EMBS International Conference on Biomedical and Health Informatics (BHI), June 2014, pp. 724--727. DOI: 10.1109/BHI.2014.6864466

        • A. Correia, L. Pinto, A. Araújo, S. Barbeiro, P. Serranho, M. Morgado, F. Caramelo, P. Menezes and R. Bernardes, Simulation of DME changes on OCT, Acta Ophthalmologica, 92: 0. DOI: 10.1111/j.1755-3768.2014.2443.x

        • Alexander V. Mamonov, Isabel N. Figueiredo, Pedro N. Figueiredo and Yen-Hsi Richard Tsai, Automated Polyp Detection in Colon Capsule Endoscopy, IEEE Transactions on Medical Imaging 33 (7), (2014) 1488-1502

        • Isabel N. Figueiredo and Sunil Kumar, Automatic Optic Disc Detection in Retinal Fundus Images Based on Geometric Features, In A. Campilho and M. Kamel (Eds.): Image Analysis and Recognition, Lecture Notes in Computer Science (LNCS 8815, Part II), pp. 285-292. Springer International Publishing (2014)

        • Isabel N. Figueiredo, Júlio S. Neves, Susana Moura, Carlos M. Oliveira and João D. Ramos, Pattern Classes in Retinal Fundus Images Based on Function Norms, In Y. Zhang and J.M.R.S. Tavares (Eds.): CompIMAGE 2014, Lecture Notes in Computer Science (LNCS) 8641, pp. 95–105. Springer International Publishing Switzerland (2014)

        • Isabel N. Figueiredo and Sunil Kumar, Wavelet-Based Computer-Aided Detection of Bright Lesions in Retinal Fundus Images, In Y. Zhang and J.M.R.S. Tavares (Eds.): CompIMAGE 2014, Lecture Notes in Computer Science (LNCS) 8641, pp. 234–240. Springer International Publishing Switzerland (2014)

          2013

          2012

          2011

          • Isabel N. Figueiredo, Pedro Figueiredo, Nuno Almeida: Image-driven parameter estimation in absorption-diffusion models of chromoscopy, SIAM Journal on Imaging Sciences, 4, 3 (2011) 884-904

          • Isabel N. Figueiredo, Carlos Leal, Giuseppe Romanazzi, Bjorn Engquist, Pedro N. Figueiredo, A convection-diffusion-shape model for aberrant colonic crypt morphogenesis, Computing and Visualization in Science, 14, 4 (2011) 157-166

          • Pedro N. Figueiredo, Isabel N. Figueiredo, Surya Prasath and Richard Tsai, Automatic polyp detection in PillCam COLON 2 capsule images and videos - preliminary feasibility report, Diagnostic and Therapeutic Endoscopy, vol. 2011, Article ID 182435, 7 pages, 2011

          • Jacob, P., Oliveira, P.E., Relative smoothing of discrete distributions with sparse observations, J. Stat. Comput. Simul. 81 (2011), 109-121

          • J. A. Ferreira, R. Serôdio, J. Vitória, An iterative method to compute zeros of quaternion polynomials, Pré-Publicação do Departamento de Matemática, Universidade de Coimbra, nº11-20

          • J. A. Ferreira,  G. Romanazzi, L. Pinto, Supraconvergence and Supercloseness in Volterra equations, Pré-Publicação do Departamento de Matemática, Universidade de Coimbra, nº11-15

          • J. A. Ferreira, L. Pinto, A non Fickian single phase flow model, CMMSE 2011, Volume II,  edt. J. Vigo Aguiar, pp. 508-519, 2011

          • J. A. Ferreira, P. de Oliveira, P. M. da Silva, Reaction-diffusion in viscoelastic materials, to appear in Journal of Computational and Applied Mathematics

          • J. A. Ferreira, P. de Oliveira, P. M. da Silva, Analitycs and numerics of drug tracking, to appear in  Journal of Computational and Applied Mathematics

          • J. A. Ferreira, P. de Oliveira, P. M. da Silva, A mathematical kit for simulating drug delivery through polymeric membranes,  CMMSE 2011, Volume II,  edt. J. Vigo Aguiar,  pp. 496-507, 2011

          • J. R. Branco, J. A. Ferreira, P. de Oliveira, Memory in mathematical modelling oh highly diffusive tumors,  CMMSE 2011, Volume I,  edt. J. Vigo Aguiar, pp. 242-253, 2011

          • S. Barbeiro J. A. Ferreira,  S. Gholami, Numerical Methods for non-Fickian flows based on Laplace transforms, (11 pages), in  CD-ROM Proceedings of the Congress on Numerical Methods in Engineering (CMNE|2011), Coimbra, Portugal, June 14-17, 2011

          • J. A. Ferreira, P. de Oliveira, P.M. da Sil, J. N. Murta, Drug delivery: from contact lens to the anterior chamber, Computer Modeling in Engineering and Science, 71, 1-14, 2011

          • S. Barbeiro, J. A. Ferreira, L. Pinto,H^1-second order convergent estimates for non Fickian models, Applied Numerical Mathematics, 61, 201-215, 2011

          • J.A. Ferreira, P. de Oliveira, P. M. da Silva, L. Simon, Flux tracking in delivery polymeric systems, Computer Applied Mathematical Modelling, 35, 4684-4696, 2011

          2010

          2009

          2007

          2004

          Other publications

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